Computational Science · Modelling · Image Analysis

Research

My research focuses on image and data analysis, physical modelling, numerical optimisation, and reproducible scientific software.

Research profile

I completed a PhD at the University of Iceland in 2021. My doctoral research focused on computational reconstruction and analysis of three-dimensional atomic structures of metal nanoclusters from aberration-corrected scanning transmission electron microscopy data.

Publications

Current unpublished manuscripts are listed below.

  • K. Sukuta, M. Van den Bossche, A. Pedersen, and H. Jónsson — Nanocluster structure deduced from AC-STEM images coupled to theoretical modelling, Nanosystems: Physics, Chemistry, Mathematics 8(6), 723–731 (2017). DOI 10.17586/2220-8054-2017-8-6-723-731

Preprints

  • K. S. Bersha, A. Peña-Torres, and H. Jónsson — From AC-STEM Image to 3D Structure: A Systematic Analysis of Au55 nanocluster, arXiv:2105.04270 (2021). Preprint.

Current manuscripts

  • Geometry-Resolved Few-Body Decomposition of HAADF-STEM Image Formation — submission-ready unpublished manuscript.
  • Geometry-Gated Interpretable Surrogates for HAADF-STEM Image Formation — submission-ready unpublished manuscript (Paper 2).
  • Uncertainty-Aware Atomistic Inference from HAADF-STEM Images: Identifiability, Nuisance Propagation, and Prospective Experimental Qualification — submission-ready unpublished manuscript (Paper 3).

Core research themes

  • Computational microscopy
  • Atomic-resolution image analysis
  • Numerical modelling
  • Structural optimisation
  • Scientific software development
  • Model validation
  • Physics-informed simulation

Current direction

Current work investigates geometry-dependent HAADF-STEM image formation, interpretable surrogate models, uncertainty-aware structural inference, and methods for validating those models against controlled reference simulations.

Technical evidence

Technical Notes

Versioned supporting documents for methods, calculations, figures, tables, diagnostics, and reproducibility details. They are clearly separated from peer-reviewed publications.

View all Technical Notes →