Articles · Category
Scientific Computing
Simulation, numerical methods, scientific software, and computational imaging.
Scientific tutorial series
Learn through the research
Self-contained tutorials explain each question at several depths, with optional links to related tutorials and Technical Notes.
Computational Atomic-Resolution STEM: Concepts and Methods
Illustrated tutorials on image formation, surrogate modelling, numerical uncertainty, interaction effects, and validation in atomic-resolution STEM.
Scientific tutorial · Scientific Computing ·
What Can an Electron Microscope Image Tell Us About Atomic Structure?
A practical introduction to joint structure–nuisance inference, heteroscedastic likelihoods, adequacy gates, protected validation, and scientifically necessary abstention.
Scientific tutorial · Scientific Computing ·
Building Fast, Trustworthy Models of Electron Microscope Images
How an accurate one-body atlas, a continuous interaction measure, independent gate testing, and abstention combine into an interpretable fast surrogate.
Scientific tutorial · Scientific Computing ·
When Can We Add Atomic Images Together?
An evidence-synchronized visual guide to when HAADF-STEM atomic responses can be added, how geometry changes non-additivity, and when higher image order is needed.
When Is Independent Atomic Addition Enough in HAADF-STEM?
This earlier teaching article has been superseded by the evidence-synchronized tutorial When Can We Add Atomic Images Together?
When Can You Trust a Faster Scientific Model?
A practical question in scientific computing is when a faster approximation can be trusted. This post outlines a validation framework using atomic-resolution STEM surrogate models as an example.